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IDIC fine-mapping

  • Pipeline overview
  • Execution
  • Workflows
  • QC and validation
  • Locus processing
    • Fine-mapping routes
    • Hailing Ducks LD annotation benchmark
    • Collector API
    • Presentations
  • GitHub
  • Pipeline overview
  • Execution
  • Workflows
  • QC and validation
  • Locus processing
  • Fine-mapping routes
  • Hailing Ducks LD annotation benchmark
  • Collector API
  • Presentations
  • GitHub

Index

C | D | E | F | L | M | N | R | S

C

  • CollectCanonicalRegionsConfig (class in collector.canonical_regions)
  • collector
    • module
  • collector.canonical_regions
    • module
  • collector.locus_breaker
    • module
  • collector.schema
    • module
  • column_names (collector.schema.DatasetSchema property)

D

  • DatasetField (class in collector.schema)
  • DatasetSchema (class in collector.schema)

E

  • empty_select_sql() (collector.schema.DatasetSchema method)

F

  • field_names (collector.schema.StructSchema property)

L

  • ListSchema (class in collector.schema)
  • LocusBreakerConfig (class in collector.locus_breaker)

M

  • model_config (collector.canonical_regions.CollectCanonicalRegionsConfig attribute)
    • (collector.locus_breaker.LocusBreakerConfig attribute)
    • (collector.schema.DatasetField attribute)
    • (collector.schema.DatasetSchema attribute)
    • (collector.schema.ListSchema attribute)
    • (collector.schema.StructSchema attribute)
  • module
    • collector
    • collector.canonical_regions
    • collector.locus_breaker
    • collector.schema

N

  • null_select_sql() (collector.schema.DatasetField method)

R

  • run_collect_canonical_regions() (in module collector.canonical_regions)
  • run_locus_breaker() (in module collector.locus_breaker)

S

  • split_pvalue() (in module collector.locus_breaker)
  • sql_type() (collector.schema.DatasetField method)
    • (collector.schema.ListSchema method)
    • (collector.schema.StructSchema method)
  • StructSchema (class in collector.schema)

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